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  5. AT5G23340

AT5G23340


Description : RNI-like superfamily protein


Gene families : OG0008043 (Archaeplastida) Phylogenetic Tree(s): OG0008043_tree ,
OG_05_0008454 (LandPlants) Phylogenetic Tree(s): OG_05_0008454_tree ,
OG_06_0008369 (SeedPlants) Phylogenetic Tree(s): OG_06_0008369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G23340
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00023180 evm_27.TU.AmTr_v1... F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10435873g0020 No alias F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_284856g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo410553 No alias F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e023067_P001 No alias F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002215 defense response to nematode IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004300 enoyl-CoA hydratase activity IEP Neighborhood
MF GO:0004301 epoxide hydrolase activity IEP Neighborhood
MF GO:0004594 pantothenate kinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
MF GO:0004829 threonine-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006435 threonyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007263 nitric oxide mediated signal transduction IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009413 response to flooding IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009819 drought recovery IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0010022 meristem determinacy IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010254 nectary development IEP Neighborhood
BP GO:0010260 animal organ senescence IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0010334 sesquiterpene synthase activity IEP Neighborhood
BP GO:0010417 glucuronoxylan biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010555 response to mannitol IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010582 floral meristem determinacy IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015665 alcohol transmembrane transporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015850 organic hydroxy compound transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Neighborhood
MF GO:0016803 ether hydrolase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019605 butyrate metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
MF GO:0034002 (R)-limonene synthase activity IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0034768 (E)-beta-ocimene synthase activity IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042214 terpene metabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043692 monoterpene metabolic process IEP Neighborhood
BP GO:0043693 monoterpene biosynthetic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0046246 terpene biosynthetic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046459 short-chain fatty acid metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046864 isoprenoid transport IEP Neighborhood
BP GO:0046865 terpenoid transport IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0047209 coniferyl-alcohol glucosyltransferase activity IEP Neighborhood
MF GO:0047760 butyrate-CoA ligase activity IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048479 style development IEP Neighborhood
MF GO:0050550 pinene synthase activity IEP Neighborhood
MF GO:0050551 myrcene synthase activity IEP Neighborhood
MF GO:0050552 (4S)-limonene synthase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072708 response to sorbitol IEP Neighborhood
MF GO:0080015 sabinene synthase activity IEP Neighborhood
BP GO:0080086 stamen filament development IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080168 abscisic acid transport IEP Neighborhood
MF GO:0090440 abscisic acid transmembrane transporter activity IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902347 response to strigolactone IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 201 224
IPR001611 Leu-rich_rpt 149 172
IPR001611 Leu-rich_rpt 254 277
IPR001611 Leu-rich_rpt 175 196
IPR001611 Leu-rich_rpt 100 119
IPR001611 Leu-rich_rpt 126 146
No external refs found!