MA_11514g0010

Description : histone (H2A)

Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree ,
OG_05_0000204 (LandPlants) Phylogenetic Tree(s): OG_05_0000204_tree ,
OG_06_0000166 (SeedPlants) Phylogenetic Tree(s): OG_06_0000166_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_11514g0010
Cluster	HCCA: Cluster_169

Target	Alias	Description	ECC score	Gene Family Method
Gb_40630	No alias	histone (H2A)	0.01	Archaeplastida
Mp3g00840.1	No alias	histone (H2A)	0.03	Archaeplastida
Smo73637	No alias	Chromatin organisation.histones.H2A-type histone	0.02	Archaeplastida
Zm00001e011643_P001	No alias	histone (H2A)	0.03	Archaeplastida
Zm00001e020483_P001	No alias	histone (H2A)	0.02	Archaeplastida
Zm00001e033014_P001	No alias	histone (H2A)	0.02	Archaeplastida
Zm00001e034815_P001	No alias	histone (H2A)	0.02	Archaeplastida
Zm00001e039735_P001	No alias	histone (H2A)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	18	96
IPR032454	Histone_H2A_C	99	132

External Links

No external refs found!