AT5G25220 (KNAT3)

Aliases : KNAT3

Description : KNOTTED1-like homeobox gene 3

Gene families : OG0000263 (Archaeplastida) Phylogenetic Tree(s): OG0000263_tree ,
OG_05_0000128 (LandPlants) Phylogenetic Tree(s): OG_05_0000128_tree ,
OG_06_0001714 (SeedPlants) Phylogenetic Tree(s): OG_06_0001714_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G25220

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00162850	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00026p00244220	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AT1G62360	BUM1, SHL, STM,...	KNOX/ELK homeobox transcription factor	0.03	Archaeplastida
AT4G08150	BP, BP1, KNAT1	KNOTTED-like from Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01004811001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
GSVIVT01009273001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01031241001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Gb_00573	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Gb_10887	No alias	transcription factor (KNOX)	0.03	Archaeplastida
LOC_Os03g51690.2	No alias	transcription factor (KNOX)	0.03	Archaeplastida
LOC_Os03g51710.1	No alias	transcription factor (KNOX)	0.03	Archaeplastida
LOC_Os07g03770.1	No alias	transcription factor (KNOX)	0.05	Archaeplastida
MA_3582g0010	No alias	transcription factor (KNOX)	0.02	Archaeplastida
Mp5g01600.1	No alias	transcription factor (KNOX)	0.02	Archaeplastida
Pp3c5_26440V3.1	No alias	KNOTTED1-like homeobox gene 3	0.02	Archaeplastida
Pp3c6_1550V3.1	No alias	KNOTTED1-like homeobox gene 3	0.03	Archaeplastida
Smo159366	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Smo415291	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
Solyc01g100510.4.1	No alias	transcription factor (KNOX)	0.06	Archaeplastida
Solyc02g081120.4.1	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Solyc04g077210.3.1	No alias	transcription factor (KNOX)	0.04	Archaeplastida
Solyc05g005090.4.1	No alias	transcription factor (KNOX)	0.05	Archaeplastida
Zm00001e000173_P003	No alias	transcription factor (KNOX)	0.05	Archaeplastida
Zm00001e005545_P001	No alias	transcription factor (KNOX)	0.02	Archaeplastida
Zm00001e005547_P001	No alias	transcription factor (KNOX)	0.04	Archaeplastida
Zm00001e011538_P001	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Zm00001e017489_P001	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Zm00001e027562_P001	No alias	transcription factor (KNOX)	0.04	Archaeplastida
Zm00001e029453_P001	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Zm00001e032761_P001	No alias	transcription factor (KNOX)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEP	Interproscan
BP	GO:0009593	detection of chemical stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009720	detection of hormone stimulus	None	Extended
BP	GO:0009722	detection of cytokinin stimulus	IEP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009726	detection of endogenous stimulus	None	Extended
BP	GO:0009735	response to cytokinin	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034097	response to cytokine	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048513	animal organ development	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071345	cellular response to cytokine stimulus	IDA	Interproscan
MF	GO:0140110	transcription regulator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006857	oligopeptide transport	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046524	sucrose-phosphate synthase activity	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005540	KNOX1	160	200
IPR005539	ELK_dom	322	343
IPR008422	Homeobox_KN_domain	362	401
IPR005541	KNOX2	217	267

External Links

No external refs found!

AT5G25220 (KNAT3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation