AT1G23160

Description : Auxin-responsive GH3 family protein

Gene families : OG0000138 (Archaeplastida) Phylogenetic Tree(s): OG0000138_tree ,
OG_05_0000189 (LandPlants) Phylogenetic Tree(s): OG_05_0000189_tree ,
OG_06_0012938 (SeedPlants) Phylogenetic Tree(s): OG_06_0012938_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G23160
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00043p00208540	evm_27.TU.AmTr_v1...	Phytohormones.auxin.conjugation and...	0.04	Archaeplastida
AT1G48660	No alias	Auxin-responsive GH3 family protein	0.07	Archaeplastida
AT2G23170	GH3.3	Auxin-responsive GH3 family protein	0.06	Archaeplastida
AT5G13360	No alias	Auxin-responsive GH3 family protein	0.05	Archaeplastida
AT5G13380	No alias	Auxin-responsive GH3 family protein	0.04	Archaeplastida
GSVIVT01027971001	No alias	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.06	Archaeplastida
Gb_04369	No alias	indole-3-acetic acid-amido synthetase	0.02	Archaeplastida
Gb_12335	No alias	Indole-3-acetic acid-amido synthetase GH3.5...	0.02	Archaeplastida
Gb_14666	No alias	no description available(sp\|a0a314ksq4\|jar6_nicat : 461.0)	0.03	Archaeplastida
Gb_14667	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.02	Archaeplastida
Gb_36596	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.03	Archaeplastida
Gb_41415	No alias	indole-3-acetic acid-amido synthetase	0.03	Archaeplastida
LOC_Os05g42150.1	No alias	indole-3-acetic acid-amido synthetase	0.02	Archaeplastida
LOC_Os11g08340.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.12...	0.04	Archaeplastida
LOC_Os11g32510.1	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.06	Archaeplastida
LOC_Os11g32520.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.13...	0.04	Archaeplastida
MA_10330250g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10432413g0010	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.02	Archaeplastida
MA_10432413g0020	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.04	Archaeplastida
MA_10434772g0010	No alias	indole-3-acetic acid-amido synthetase	0.05	Archaeplastida
MA_212507g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Smo110439	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.02	Archaeplastida
Smo125443	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.02	Archaeplastida
Smo416246	No alias	Jasmonic acid-amido synthetase JAR1 OS=Oryza sativa...	0.03	Archaeplastida
Smo432454	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.03	Archaeplastida
Solyc00g500218.1.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.04	Archaeplastida
Solyc02g064830.4.1	No alias	indole-3-acetic acid-amido synthetase	0.04	Archaeplastida
Solyc06g048710.2.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Solyc07g054580.3.1	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.02	Archaeplastida
Solyc10g006610.4.1	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.03	Archaeplastida
Solyc10g009610.2.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Solyc12g005310.2.1	No alias	indole-3-acetic acid-amido synthetase	0.03	Archaeplastida
Zm00001e011159_P002	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	Archaeplastida
Zm00001e016441_P001	No alias	Jasmonic acid-amido synthetase JAR1 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	ISS	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004311	farnesyltranstransferase activity	IEP	Neighborhood
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	Neighborhood
MF	GO:0004536	deoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004655	porphobilinogen synthase activity	IEP	Neighborhood
MF	GO:0004659	prenyltransferase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Neighborhood
BP	GO:0006563	L-serine metabolic process	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
BP	GO:0007043	cell-cell junction assembly	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
MF	GO:0008422	beta-glucosidase activity	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
MF	GO:0015926	glucosidase activity	IEP	Neighborhood
BP	GO:0016093	polyprenol metabolic process	IEP	Neighborhood
BP	GO:0016094	polyprenol biosynthetic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0019137	thioglucosidase activity	IEP	Neighborhood
BP	GO:0019348	dolichol metabolic process	IEP	Neighborhood
BP	GO:0019408	dolichol biosynthetic process	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
BP	GO:0034329	cell junction assembly	IEP	Neighborhood
BP	GO:0034330	cell junction organization	IEP	Neighborhood
CC	GO:0044426	cell wall part	IEP	Neighborhood
CC	GO:0044462	external encapsulating structure part	IEP	Neighborhood
BP	GO:0045165	cell fate commitment	IEP	Neighborhood
BP	GO:0045216	cell-cell junction organization	IEP	Neighborhood
MF	GO:0045547	dehydrodolichyl diphosphate synthase activity	IEP	Neighborhood
CC	GO:0048226	Casparian strip	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
BP	GO:0048829	root cap development	IEP	Neighborhood
MF	GO:1990135	flavonoid sulfotransferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004993	GH3	18	560

External Links

No external refs found!

AT1G23160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation