AT5G25890 (IAA28, IAR2)

Aliases : IAA28, IAR2

Description : indole-3-acetic acid inducible 28

Gene families : OG0000129 (Archaeplastida) Phylogenetic Tree(s): OG0000129_tree ,
OG_05_0000051 (LandPlants) Phylogenetic Tree(s): OG_05_0000051_tree ,
OG_06_0002617 (SeedPlants) Phylogenetic Tree(s): OG_06_0002617_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G25890
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00266760	evm_27.TU.AmTr_v1...	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana	0.04	Archaeplastida
AT1G04250	AXR3, IAA17	AUX/IAA transcriptional regulator family protein	0.06	Archaeplastida
AT1G04550	IAA12, BDL	AUX/IAA transcriptional regulator family protein	0.05	Archaeplastida
AT1G52830	SHY1, IAA6	indole-3-acetic acid 6	0.04	Archaeplastida
AT4G14560	IAA1, AXR5	indole-3-acetic acid inducible	0.03	Archaeplastida
GSVIVT01017158001	No alias	Auxin-induced protein AUX22 OS=Glycine max	0.03	Archaeplastida
GSVIVT01017711001	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica	0.03	Archaeplastida
GSVIVT01022048001	No alias	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_36564	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os03g43400.1	No alias	Auxin-responsive protein IAA11 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os03g43410.1	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os05g14180.1	No alias	Auxin-responsive protein IAA17 OS=Oryza sativa subsp....	0.02	Archaeplastida
LOC_Os06g07040.1	No alias	Auxin-responsive protein IAA20 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os06g39590.1	No alias	Auxin-responsive protein IAA23 OS=Oryza sativa subsp....	0.06	Archaeplastida
LOC_Os12g40900.1	No alias	Auxin-responsive protein IAA31 OS=Oryza sativa subsp....	0.05	Archaeplastida
MA_123046g0010	No alias	repressor component Aux/IAA of auxin receptor complex	0.03	Archaeplastida
Mp6g05000.1	No alias	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc06g053830.3.1	No alias	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Zm00001e005073_P001	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.05	Archaeplastida
Zm00001e012423_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e017434_P002	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp....	0.02	Archaeplastida
Zm00001e025448_P001	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp....	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006417	regulation of translation	ISS	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0010015	root morphogenesis	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010101	post-embryonic root morphogenesis	None	Extended
BP	GO:0010102	lateral root morphogenesis	IMP	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010608	posttranscriptional regulation of gene expression	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034248	regulation of cellular amide metabolic process	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0090697	post-embryonic plant organ morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004805	trehalose-phosphatase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006148	inosine catabolic process	IEP	Neighborhood
BP	GO:0006152	purine nucleoside catabolic process	IEP	Neighborhood
BP	GO:0006154	adenosine catabolic process	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
MF	GO:0008477	purine nucleosidase activity	IEP	Neighborhood
MF	GO:0008493	tetracycline transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009119	ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0009164	nucleoside catabolic process	IEP	Neighborhood
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Neighborhood
BP	GO:0009751	response to salicylic acid	IEP	Neighborhood
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	Neighborhood
BP	GO:0010026	trichome differentiation	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010197	polar nucleus fusion	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015665	alcohol transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Neighborhood
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	Neighborhood
BP	GO:0042278	purine nucleoside metabolic process	IEP	Neighborhood
BP	GO:0042454	ribonucleoside catabolic process	IEP	Neighborhood
MF	GO:0042895	antibiotic transmembrane transporter activity	IEP	Neighborhood
MF	GO:0043424	protein histidine kinase binding	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
BP	GO:0046085	adenosine metabolic process	IEP	Neighborhood
BP	GO:0046102	inosine metabolic process	IEP	Neighborhood
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0046130	purine ribonucleoside catabolic process	IEP	Neighborhood
MF	GO:0047622	adenosine nucleosidase activity	IEP	Neighborhood
MF	GO:0047724	inosine nucleosidase activity	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:0072523	purine-containing compound catabolic process	IEP	Neighborhood
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	Neighborhood
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0080160	selenate transport	IEP	Neighborhood
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	125	170
IPR033389	AUX/IAA_dom	27	117

External Links

No external refs found!

AT5G25890 (IAA28, IAR2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation