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Description : putative silicon efflux transporter (LSI2)
Gene families : OG0001845 (Archaeplastida) Phylogenetic Tree(s): OG0001845_tree ,
OG_05_0001690 (LandPlants) Phylogenetic Tree(s): OG_05_0001690_tree ,
OG_06_0073578 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_133755g0010 | |
| Cluster | HCCA: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Smo97439 | No alias | Solute transport.carrier-mediated transport.IT... | 0.03 | Archaeplastida | |
| Zm00001e000055_P001 | No alias | putative silicon efflux transporter (LSI2) | 0.02 | Archaeplastida | |
| Zm00001e002282_P001 | No alias | putative silicon efflux transporter (LSI2) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Neighborhood |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Neighborhood |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004680 | Cit_transptr-like_dom | 24 | 445 |
| No external refs found! |