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  5. MA_135496g0010

MA_135496g0010


Description : Root phototropism protein 3 OS=Arabidopsis thaliana (sp|q9fmf5|rpt3_arath : 219.0)


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0003027 (LandPlants) Phylogenetic Tree(s): OG_05_0003027_tree ,
OG_06_0011854 (SeedPlants) Phylogenetic Tree(s): OG_06_0011854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_135496g0010
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00109650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00077p00161250 evm_27.TU.AmTr_v1... Root phototropism protein 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00088p00177890 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
AMTR_s00144p00020600 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G67900 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G48130 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
GSVIVT01003773001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
GSVIVT01016261001 No alias BTB/POZ domain-containing protein At5g03250... 0.02 Archaeplastida
GSVIVT01027413001 No alias BTB/POZ domain-containing protein At5g17580... 0.02 Archaeplastida
GSVIVT01037852001 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_32071 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
LOC_Os02g35970.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.05 Archaeplastida
LOC_Os03g22600.1 No alias BTB/POZ domain-containing protein At1g03010... 0.05 Archaeplastida
LOC_Os03g52880.1 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.05 Archaeplastida
MA_15614g0010 No alias BTB/POZ domain-containing protein At1g67900... 0.04 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.06 Archaeplastida
MA_89781g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.02 Archaeplastida
Pp3c21_3700V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c3_20030V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
Solyc01g098820.3.1 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc02g079860.1.1 No alias BTB/POZ domain-containing protein At3g22104... 0.02 Archaeplastida
Solyc07g052970.3.1 No alias BTB/POZ domain-containing protein At3g22104... 0.02 Archaeplastida
Zm00001e005610_P003 No alias BTB/POZ domain-containing protein At5g66560... 0.02 Archaeplastida
Zm00001e008748_P001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e014883_P001 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
Zm00001e016726_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e033674_P003 No alias BTB/POZ domain-containing protein At5g47800... 0.02 Archaeplastida
Zm00001e038209_P001 No alias BTB/POZ domain-containing protein At1g03010... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 23 111
No external refs found!