1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_136157g0010

MA_136157g0010


Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana (sp|q947d2|praf1_arath : 734.0)


Gene families : OG0000543 (Archaeplastida) Phylogenetic Tree(s): OG0000543_tree ,
OG_05_0000407 (LandPlants) Phylogenetic Tree(s): OG_05_0000407_tree ,
OG_06_0000284 (SeedPlants) Phylogenetic Tree(s): OG_06_0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_136157g0010
Cluster HCCA: Cluster_518

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00256680 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
AT1G76950 PRAF1 Regulator of chromosome condensation (RCC1) family with... 0.02 Archaeplastida
GSVIVT01020014001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
GSVIVT01037259001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
Gb_40615 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
LOC_Os04g58960.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
LOC_Os05g01610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
LOC_Os05g31920.2 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
Pp3c10_3893V3.1 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Archaeplastida
Smo180358 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
Solyc02g081250.3.1 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.03 Archaeplastida
Solyc03g116360.2.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
Solyc11g065120.3.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
Zm00001e007139_P001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 Archaeplastida
Zm00001e007456_P003 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 Archaeplastida
Zm00001e015467_P001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 Archaeplastida
Zm00001e018599_P001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.05 Archaeplastida
Zm00001e023246_P001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 644 710
IPR000408 Reg_chr_condens 593 640
IPR000408 Reg_chr_condens 490 536
IPR000408 Reg_chr_condens 539 588
IPR000408 Reg_chr_condens 368 420
IPR000408 Reg_chr_condens 424 472
IPR000408 Reg_chr_condens 317 365
No external refs found!