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  5. MA_136385g0010

MA_136385g0010


Description : Eukaryotic translation initiation factor NCBP OS=Oryza sativa subsp. japonica (sp|q10nq9|if4e3_orysj : 150.0)


Gene families : OG0006655 (Archaeplastida) Phylogenetic Tree(s): OG0006655_tree ,
OG_05_0007725 (LandPlants) Phylogenetic Tree(s): OG_05_0007725_tree ,
OG_06_0009434 (SeedPlants) Phylogenetic Tree(s): OG_06_0009434_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_136385g0010
Cluster HCCA: Cluster_411

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.152 No alias Eukaryotic translation initiation factor NCBP... 0.02 Archaeplastida
Cpa|evm.model.tig00000241.158 No alias Eukaryotic translation initiation factor NCBP OS=Oryza... 0.01 Archaeplastida
LOC_Os03g15590.1 No alias RNA-cap-binding factor (4EHP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 1 60
No external refs found!