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  5. MA_137427g0010

MA_137427g0010


Description : C3H zinc finger transcription factor


Gene families : OG0000421 (Archaeplastida) Phylogenetic Tree(s): OG0000421_tree ,
OG_05_0000820 (LandPlants) Phylogenetic Tree(s): OG_05_0000820_tree ,
OG_06_0002308 (SeedPlants) Phylogenetic Tree(s): OG_06_0002308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_137427g0010
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019118001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
GSVIVT01019119001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
Gb_02527 No alias C3H zinc finger transcription factor 0.04 Archaeplastida
Pp3c26_12270V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 Archaeplastida
Pp3c26_12400V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Archaeplastida
Pp3c4_29750V3.1 No alias zinc finger protein 1 0.04 Archaeplastida
Zm00001e039538_P001 No alias C3H zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 337 362
IPR000571 Znf_CCCH 384 408
IPR000571 Znf_CCCH 121 145
IPR000571 Znf_CCCH 75 100
IPR000571 Znf_CCCH 167 191
No external refs found!