1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_13750g0010

MA_13750g0010


Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)


Gene families : OG0003861 (Archaeplastida) Phylogenetic Tree(s): OG0003861_tree ,
OG_05_0096196 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0077487 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_13750g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT2G13540 ATCBP80, ABH1, ENS, CBP80 ARM repeat superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00021589.24 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 Archaeplastida
Cre12.g524100 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.03 Archaeplastida
GSVIVT01037230001 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 Archaeplastida
Gb_13655 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.03 Archaeplastida
LOC_Os03g22570.1 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.02 Archaeplastida
Mp1g05560.1 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.03 Archaeplastida
Pp3c6_18600V3.1 No alias ARM repeat superfamily protein 0.02 Archaeplastida
Smo115849 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.04 Archaeplastida
Solyc10g005530.3.1 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.06 Archaeplastida
Zm00001e001643_P004 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 11 135
No external refs found!