AT1G23380 (KNAT6, KNAT6L, KNAT6S)

Aliases : KNAT6, KNAT6L, KNAT6S

Description : KNOTTED1-like homeobox gene 6

Gene families : OG0000263 (Archaeplastida) Phylogenetic Tree(s): OG0000263_tree ,
OG_05_0000128 (LandPlants) Phylogenetic Tree(s): OG_05_0000128_tree ,
OG_06_0003089 (SeedPlants) Phylogenetic Tree(s): OG_06_0003089_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G23380
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01004811001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
GSVIVT01009273001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
GSVIVT01013790001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.06	Archaeplastida
GSVIVT01031241001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
Gb_00572	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Gb_00573	No alias	transcription factor (KNOX)	0.04	Archaeplastida
Gb_10887	No alias	transcription factor (KNOX)	0.04	Archaeplastida
Gb_14470	No alias	transcription factor (KNOX)	0.03	Archaeplastida
LOC_Os03g56140.1	No alias	transcription factor (KNOX)	0.03	Archaeplastida
LOC_Os06g43860.1	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Smo135843	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Solyc05g005090.4.1	No alias	transcription factor (KNOX)	0.03	Archaeplastida
Zm00001e005545_P001	No alias	transcription factor (KNOX)	0.07	Archaeplastida
Zm00001e017489_P001	No alias	transcription factor (KNOX)	0.04	Archaeplastida
Zm00001e027562_P001	No alias	transcription factor (KNOX)	0.04	Archaeplastida
Zm00001e029453_P001	No alias	transcription factor (KNOX)	0.04	Archaeplastida
Zm00001e039044_P001	No alias	transcription factor (KNOX)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	RCA	Interproscan
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010073	meristem maintenance	IGI	Interproscan
BP	GO:0010073	meristem maintenance	RCA	Interproscan
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0048513	animal organ development	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Neighborhood
BP	GO:0000910	cytokinesis	IEP	Neighborhood
BP	GO:0000911	cytokinesis by cell plate formation	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0004044	amidophosphoribosyltransferase activity	IEP	Neighborhood
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005372	water transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005819	spindle	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006144	purine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0006338	chromatin remodeling	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0006865	amino acid transport	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
BP	GO:0007017	microtubule-based process	IEP	Neighborhood
BP	GO:0007112	male meiosis cytokinesis	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
BP	GO:0007349	cellularization	IEP	Neighborhood
MF	GO:0008395	steroid hydroxylase activity	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008536	Ran GTPase binding	IEP	Neighborhood
BP	GO:0009112	nucleobase metabolic process	IEP	Neighborhood
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0009558	embryo sac cellularization	IEP	Neighborhood
BP	GO:0009560	embryo sac egg cell differentiation	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009734	auxin-activated signaling pathway	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0009934	regulation of meristem structural organization	IEP	Neighborhood
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009939	positive regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009967	positive regulation of signal transduction	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010245	radial microtubular system formation	IEP	Neighborhood
BP	GO:0010268	brassinosteroid homeostasis	IEP	Neighborhood
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0010452	histone H3-K36 methylation	IEP	Neighborhood
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0010647	positive regulation of cell communication	IEP	Neighborhood
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015250	water channel activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
BP	GO:0018345	protein palmitoylation	IEP	Neighborhood
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0023056	positive regulation of signaling	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0031497	chromatin assembly	IEP	Neighborhood
BP	GO:0031507	heterochromatin assembly	IEP	Neighborhood
BP	GO:0032506	cytokinetic process	IEP	Neighborhood
BP	GO:0033206	meiotic cytokinesis	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0045787	positive regulation of cell cycle	IEP	Neighborhood
BP	GO:0046112	nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Neighborhood
BP	GO:0048444	floral organ morphogenesis	IEP	Neighborhood
BP	GO:0048445	carpel morphogenesis	IEP	Neighborhood
BP	GO:0048446	petal morphogenesis	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0048829	root cap development	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051568	histone H3-K4 methylation	IEP	Neighborhood
BP	GO:0055088	lipid homeostasis	IEP	Neighborhood
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0070828	heterochromatin organization	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
BP	GO:1902410	mitotic cytokinetic process	IEP	Neighborhood
BP	GO:1903047	mitotic cell cycle process	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005541	KNOX2	138	184
IPR008422	Homeobox_KN_domain	264	303
IPR005540	KNOX1	85	126
IPR005539	ELK_dom	224	245

External Links

No external refs found!

AT1G23380 (KNAT6, KNAT6L, KNAT6S)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation