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  5. MA_14639g0010

MA_14639g0010


Description : pri-miRNA recruitment factor (STV1). component RPL24 of LSU proteome component


Gene families : OG0001838 (Archaeplastida) Phylogenetic Tree(s): OG0001838_tree ,
OG_05_0001764 (LandPlants) Phylogenetic Tree(s): OG_05_0001764_tree ,
OG_06_0077573 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_14639g0010
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00095150 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AT2G36620 RPL24A ribosomal protein L24 0.05 Archaeplastida
AT3G53020 STV1, RPL24, RPL24B Ribosomal protein L24e family protein 0.04 Archaeplastida
Cre09.g391097 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01010601001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01033743001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
GSVIVT01034676001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Gb_07396 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 Archaeplastida
LOC_Os01g59990.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 Archaeplastida
LOC_Os07g12250.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 Archaeplastida
MA_6199g0020 No alias No annotation 0.03 Archaeplastida
Mp5g17510.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 Archaeplastida
Pp3c13_10770V3.1 No alias ribosomal protein L24 0.05 Archaeplastida
Pp3c1_16170V3.1 No alias ribosomal protein L24 0.03 Archaeplastida
Pp3c3_10840V3.1 No alias ribosomal protein L24 0.03 Archaeplastida
Pp3c3_8930V3.1 No alias Ribosomal protein L24e family protein 0.02 Archaeplastida
Pp3c4_25160V3.1 No alias ribosomal protein L24 0.03 Archaeplastida
Pp3c4_25170V3.1 No alias ribosomal protein L24 0.04 Archaeplastida
Solyc09g008800.3.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 Archaeplastida
Solyc10g083740.3.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 Archaeplastida
Solyc10g085480.2.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 Archaeplastida
Zm00001e004947_P001 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.04 Archaeplastida
Zm00001e012463_P004 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045048 protein insertion into ER membrane IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 28 86
No external refs found!