MA_15386g0010

Description : A-class RAB GTPase

Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree ,
OG_06_0000127 (SeedPlants) Phylogenetic Tree(s): OG_06_0000127_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_15386g0010
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AT1G28550	RABA1i, AtRABA1i	RAB GTPase homolog A1I	0.01	Archaeplastida
AT2G33870	ArRABA1h	RAB GTPase homolog A1H	0.01	Archaeplastida
AT3G12160	RABA4D, ATRABA4D	RAB GTPase homolog A4D	0.01	Archaeplastida
AT5G60860	AtRABA1f, RABA1f	RAB GTPase homolog A1F	0.08	Archaeplastida
GSVIVT01014250001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	Archaeplastida
GSVIVT01023225001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	Archaeplastida
Gb_03447	No alias	A-class RAB GTPase	0.01	Archaeplastida
MA_129080g0010	No alias	A-class RAB GTPase	0.05	Archaeplastida
Pp3c14_15250V3.1	No alias	RAB GTPase homolog A2B	0.05	Archaeplastida
Pp3c14_15310V3.1	No alias	RAB GTPase homolog A2B	0.04	Archaeplastida
Smo232291	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.05	Archaeplastida
Solyc03g006270.3.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
Solyc03g079900.3.1	No alias	A-class RAB GTPase	0.06	Archaeplastida
Solyc05g052900.3.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
Zm00001e009700_P001	No alias	A-class RAB GTPase	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!