MA_158002g0020

Description : pectin methylesterase

Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_158002g0020
Cluster	HCCA: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00238240	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
AMTR_s00040p00233690	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
AMTR_s00129p00033080	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.04	Archaeplastida
AMTR_s00129p00044320	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
AMTR_s00129p00047530	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
AMTR_s00129p00070300	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
AMTR_s00129p00074780	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
AT1G02810	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.04	Archaeplastida
AT1G53830	ATPME2, PME2	pectin methylesterase 2	0.04	Archaeplastida
AT2G45220	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.05	Archaeplastida
AT3G10710	RHS12	root hair specific 12	0.03	Archaeplastida
AT3G59010	PME61	pectin methylesterase 61	0.03	Archaeplastida
AT4G02300	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	Archaeplastida
AT5G04960	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	Archaeplastida
AT5G04970	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.04	Archaeplastida
AT5G49180	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
AT5G51500	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	Archaeplastida
GSVIVT01011699001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
GSVIVT01018622001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
GSVIVT01026518001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
GSVIVT01027652001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
GSVIVT01028040001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
GSVIVT01031164001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.05	Archaeplastida
GSVIVT01031667001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
GSVIVT01037348001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
GSVIVT01037349001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
GSVIVT01037352001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	Archaeplastida
Gb_03174	No alias	pectin methylesterase	0.02	Archaeplastida
Gb_05254	No alias	pectin methylesterase	0.03	Archaeplastida
Gb_15174	No alias	pectin methylesterase	0.02	Archaeplastida
Gb_21388	No alias	pectin methylesterase	0.03	Archaeplastida
Gb_25439	No alias	pectin methylesterase	0.05	Archaeplastida
Gb_28387	No alias	pectin methylesterase	0.03	Archaeplastida
Gb_35881	No alias	pectin methylesterase	0.05	Archaeplastida
LOC_Os02g54190.1	No alias	pectin methylesterase	0.03	Archaeplastida
LOC_Os11g08750.1	No alias	pectin methylesterase	0.02	Archaeplastida
MA_10434624g0020	No alias	pectin methylesterase	0.04	Archaeplastida
MA_10435891g0010	No alias	pectin methylesterase	0.04	Archaeplastida
MA_10436266g0010	No alias	Pectinesterase 3 OS=Citrus sinensis...	0.05	Archaeplastida
MA_177599g0010	No alias	pectin methylesterase	0.03	Archaeplastida
MA_18093g0010	No alias	Pectinesterase 2.1 OS=Solanum lycopersicum...	0.04	Archaeplastida
MA_26888g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_354248g0010	No alias	pectin methylesterase	0.05	Archaeplastida
MA_436039g0010	No alias	pectin methylesterase	0.03	Archaeplastida
MA_51464g0010	No alias	pectin methylesterase	0.04	Archaeplastida
MA_68362g0010	No alias	pectin methylesterase	0.03	Archaeplastida
MA_96515g0010	No alias	pectin methylesterase	0.03	Archaeplastida
Mp8g00060.1	No alias	pectin methylesterase	0.03	Archaeplastida
Pp3c10_1100V3.1	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
Pp3c21_11740V3.1	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
Pp3c8_3840V3.1	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Archaeplastida
Smo114014	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
Smo266995	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	Archaeplastida
Smo420760	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.06	Archaeplastida
Solyc01g066390.4.1	No alias	Probable pectinesterase/pectinesterase inhibitor 58...	0.02	Archaeplastida
Solyc01g066420.3.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc01g098940.3.1	No alias	pectin methylesterase	0.02	Archaeplastida
Solyc01g099960.4.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc02g080220.3.1	No alias	pectin methylesterase	0.02	Archaeplastida
Solyc03g078100.3.1	No alias	pectin methylesterase	0.02	Archaeplastida
Solyc03g083840.3.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc03g123620.4.1	No alias	pectin methylesterase	0.04	Archaeplastida
Solyc03g123630.4.1	No alias	pectin methylesterase	0.02	Archaeplastida
Solyc06g009180.3.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc07g017600.3.1	No alias	pectin methylesterase	0.03	Archaeplastida
Solyc07g064190.3.1	No alias	pectin methylesterase	0.02	Archaeplastida
Solyc12g099410.2.1	No alias	pectin methylesterase	0.02	Archaeplastida
Zm00001e014142_P001	No alias	pectin methylesterase	0.02	Archaeplastida
Zm00001e017514_P001	No alias	pectin methylesterase	0.04	Archaeplastida
Zm00001e025576_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e026790_P001	No alias	pectin methylesterase	0.02	Archaeplastida
Zm00001e034231_P001	No alias	pectin methylesterase	0.02	Archaeplastida
Zm00001e041006_P001	No alias	pectin methylesterase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	262	559
IPR006501	Pectinesterase_inhib_dom	66	211

External Links

No external refs found!

MA_158002g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation