1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G23550

AT1G23550 (SRO2)


Aliases : SRO2

Description : similar to RCD one 2


Gene families : OG0000979 (Archaeplastida) Phylogenetic Tree(s): OG0000979_tree ,
OG_05_0000648 (LandPlants) Phylogenetic Tree(s): OG_05_0000648_tree ,
OG_06_0000679 (SeedPlants) Phylogenetic Tree(s): OG_06_0000679_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G23550
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00059840 evm_27.TU.AmTr_v1... Probable inactive poly [ADP-ribose] polymerase SRO1... 0.02 Archaeplastida
Pp3c16_6270V3.1 No alias WWE protein-protein interaction domain protein family 0.02 Archaeplastida
Pp3c25_950V3.1 No alias WWE protein-protein interaction domain protein family 0.03 Archaeplastida
Solyc08g005270.3.1 No alias Inactive poly [ADP-ribose] polymerase RCD1... 0.02 Archaeplastida
Zm00001e023927_P003 No alias Inactive poly [ADP-ribose] polymerase RCD1... 0.02 Archaeplastida
Zm00001e038639_P002 No alias Probable inactive poly [ADP-ribose] polymerase SRO2... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
BP GO:0010583 response to cyclopentenone RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000026 alpha-1,2-mannosyltransferase activity IEP Neighborhood
MF GO:0000030 mannosyltransferase activity IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004376 glycolipid mannosyltransferase activity IEP Neighborhood
MF GO:0004377 GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEP Neighborhood
MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Neighborhood
MF GO:0004644 phosphoribosylglycinamide formyltransferase activity IEP Neighborhood
MF GO:0005343 organic acid:sodium symporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
MF GO:0008508 bile acid:sodium symporter activity IEP Neighborhood
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015125 bile acid transmembrane transporter activity IEP Neighborhood
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Neighborhood
MF GO:0015370 solute:sodium symporter activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0030148 sphingolipid biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0036503 ERAD pathway IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
MF GO:0045140 inositol phosphoceramide synthase activity IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0051304 chromosome separation IEP Neighborhood
BP GO:0051307 meiotic chromosome separation IEP Neighborhood
MF GO:0070300 phosphatidic acid binding IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
MF GO:0080045 quercetin 3'-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080148 negative regulation of response to water deprivation IEP Neighborhood
BP GO:0080186 developmental vegetative growth IEP Neighborhood
MF GO:0140161 monocarboxylate:sodium symporter activity IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:2000070 regulation of response to water deprivation IEP Neighborhood
InterPro domains Description Start Stop
IPR022003 RST 251 316
No external refs found!