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  5. MA_175611g0010

MA_175611g0010


Description : Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica (sp|q65xl5|wtf1_orysj : 223.0)


Gene families : OG0001104 (Archaeplastida) Phylogenetic Tree(s): OG0001104_tree ,
OG_05_0001147 (LandPlants) Phylogenetic Tree(s): OG_05_0001147_tree ,
OG_06_0006107 (SeedPlants) Phylogenetic Tree(s): OG_06_0006107_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_175611g0010
Cluster HCCA: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00229190 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 Archaeplastida
AT5G21970 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 Archaeplastida
AT5G62990 emb1692 Ubiquitin carboxyl-terminal hydrolase family protein 0.02 Archaeplastida
Pp3c18_21300V3.1 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.02 Archaeplastida
Zm00001e000591_P002 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e011811_P001 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 Archaeplastida
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
InterPro domains Description Start Stop
IPR021099 PORR_domain 67 396
No external refs found!