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  5. AT5G39130

AT5G39130


Description : RmlC-like cupins superfamily protein


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0000030 (SeedPlants) Phylogenetic Tree(s): OG_06_0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39130
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00119070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00120230 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AT3G04150 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04170 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04180 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04190 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G04200 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT5G38930 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020142001 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01028220001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01028222001 No alias Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031079001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031082001 No alias Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_00713 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Gb_05078 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.02 Archaeplastida
Gb_10684 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.06 Archaeplastida
Gb_17046 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.03 Archaeplastida
Gb_17655 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_18428 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_30305 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os01g14670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os01g18170.1 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os01g72300.1 No alias Germin-like protein 1-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g48760.1 No alias Putative germin-like protein 3-4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os03g48770.1 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os03g48780.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g58980.1 No alias Germin-like protein 3-7 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g22080.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g52720.1 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g19670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g08980.1 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g09000.1 No alias Germin-like protein 8-6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09010.1 No alias Germin-like protein 8-7 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g09040.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g09060.1 No alias Germin-like protein 8-10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g13440.1 No alias Germin-like protein 8-12 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os12g05840.1 No alias Germin-like protein 12-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os12g05880.1 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10255546g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_5449g0010 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_828526g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g01610.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01620.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Mp2g01630.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01660.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.05 Archaeplastida
Mp5g23430.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23510.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.05 Archaeplastida
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Pp3c14_2830V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c23_1379V3.1 No alias germin-like protein 5 0.01 Archaeplastida
Pp3c4_3770V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Smo227294 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo423673 No alias No description available 0.02 Archaeplastida
Smo428138 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo78485 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo81725 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo89841 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g102380.5.1.1 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.03 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g113580.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g090000.1.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g090005.1.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.06 Archaeplastida
Solyc09g090040.3.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g006980.1.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e005327_P001 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e006921_P001 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e013714_P001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e021630_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e021636_P002 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021639_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e039959_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004034 aldose 1-epimerase activity IEP Neighborhood
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004567 beta-mannosidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005983 starch catabolic process IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
BP GO:0006624 vacuolar protein processing IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008655 pyrimidine-containing compound salvage IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009251 glucan catabolic process IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009806 lignan metabolic process IEP Neighborhood
BP GO:0009807 lignan biosynthetic process IEP Neighborhood
BP GO:0009808 lignin metabolic process IEP Neighborhood
BP GO:0009809 lignin biosynthetic process IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009964 negative regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
BP GO:0010023 proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
BP GO:0010224 response to UV-B IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
MF GO:0016711 flavonoid 3'-monooxygenase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0016985 mannan endo-1,4-beta-mannosidase activity IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
CC GO:0031312 extrinsic component of organelle membrane IEP Neighborhood
MF GO:0033729 anthocyanidin reductase activity IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
CC GO:0042406 extrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0044247 cellular polysaccharide catabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
MF GO:0045552 dihydrokaempferol 4-reductase activity IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0050589 leucocyanidin oxygenase activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
BP GO:0080027 response to herbivore IEP Neighborhood
BP GO:1900384 regulation of flavonol biosynthetic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 63 213
No external refs found!