MA_18403g0020

Description : Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana (sp|q8h1e4|rap24_arath : 102.0)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000849 (SeedPlants) Phylogenetic Tree(s): OG_06_0000849_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_18403g0020
Cluster	HCCA: Cluster_433

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00057p00191330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.12	Archaeplastida
AMTR_s00129p00112550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.05	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.06	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013914001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01014291001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028050001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01032961001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_07949	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g64790.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.02	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g25260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g41760.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g09390.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os09g20350.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_2446g0010	No alias	Ethylene-responsive transcription factor ERF053...	0.11	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
Mp4g22290.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Mp5g02590.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Mp5g22160.1	No alias	Ethylene-responsive transcription factor ERF112...	0.01	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c16_4710V3.1	No alias	ethylene response factor 7	0.02	Archaeplastida
Pp3c17_10170V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Pp3c1_5010V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c1_7800V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c22_1800V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.01	Archaeplastida
Pp3c26_13260V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c2_36690V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c6_16660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_20480V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc03g118190.4.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g065820.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc12g008350.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e006692_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e018522_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e026573_P001	No alias	transcription factor (DREB)	0.09	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	27	72

External Links

No external refs found!

MA_18403g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation