AT5G40430 (MYB22, AtMYB22)

Aliases : MYB22, AtMYB22

Description : myb domain protein 22

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40430
Cluster	HCCA: Cluster_181

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00225600	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00024p00137930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00024p00224470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AT1G26780	AtMYB117, LOF1, MYB117	myb domain protein 117	0.04	Archaeplastida
AT1G43330	No alias	Homeodomain-like superfamily protein	0.05	Archaeplastida
AT2G39880	AtMYB25, MYB25	myb domain protein 25	0.04	Archaeplastida
AT3G23250	ATMYB15, ATY19, MYB15	myb domain protein 15	0.04	Archaeplastida
AT3G27785	PGA37, ATMYB118, MYB118	myb domain protein 118	0.06	Archaeplastida
AT3G29020	MYB110, AtMYB110	myb domain protein 110	0.04	Archaeplastida
AT5G39700	MYB89, AtMYB89	myb domain protein 89	0.07	Archaeplastida
Cre07.g345350	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01007731001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01012778001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01027182001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01034943001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
LOC_Os01g50110.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g63680.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os01g74410.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os02g41510.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os03g26130.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g04210.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os06g06740.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os11g47460.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_101790g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_4704g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
Pp3c11_5410V3.1	No alias	myb domain protein 16	0.02	Archaeplastida
Solyc03g093890.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g007690.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc09g008250.4.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc09g011780.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc11g011050.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e009831_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e023733_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e035025_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	Neighborhood
MF	GO:0003883	CTP synthase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0051219	phosphoprotein binding	IEP	Neighborhood
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
MF	GO:0060089	molecular transducer activity	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G40430 (MYB22, AtMYB22)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation