Description : myb family transcription factor
Gene families : OG0004760 (Archaeplastida) Phylogenetic Tree(s): OG0004760_tree ,
OG_05_0004740 (LandPlants) Phylogenetic Tree(s): OG_05_0004740_tree ,
OG_06_0005271 (SeedPlants) Phylogenetic Tree(s): OG_06_0005271_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G41020 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_06266 | No alias | transcription termination factor (TTF1). transcription... | 0.03 | Archaeplastida | |
LOC_Os06g19980.1 | No alias | transcription termination factor (TTF1). transcription... | 0.08 | Archaeplastida | |
MA_10431881g0010 | No alias | transcription termination factor (TTF1). transcription... | 0.04 | Archaeplastida | |
Solyc03g019800.4.1 | No alias | transcription termination factor (TTF1). transcription... | 0.05 | Archaeplastida | |
Zm00001e021684_P001 | No alias | transcription termination factor (TTF1). transcription... | 0.07 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
BP | GO:0000412 | histone peptidyl-prolyl isomerization | IEP | Neighborhood |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
BP | GO:0000911 | cytokinesis by cell plate formation | IEP | Neighborhood |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
MF | GO:0001085 | RNA polymerase II transcription factor binding | IEP | Neighborhood |
MF | GO:0001091 | RNA polymerase II basal transcription factor binding | IEP | Neighborhood |
MF | GO:0001093 | TFIIB-class transcription factor binding | IEP | Neighborhood |
MF | GO:0001098 | basal transcription machinery binding | IEP | Neighborhood |
MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
MF | GO:0004004 | ATP-dependent RNA helicase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
CC | GO:0005778 | peroxisomal membrane | IEP | Neighborhood |
CC | GO:0005829 | cytosol | IEP | Neighborhood |
CC | GO:0005911 | cell-cell junction | IEP | Neighborhood |
CC | GO:0005956 | protein kinase CK2 complex | IEP | Neighborhood |
BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
BP | GO:0006996 | organelle organization | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
BP | GO:0007031 | peroxisome organization | IEP | Neighborhood |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
MF | GO:0008186 | RNA-dependent ATPase activity | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
CC | GO:0009506 | plasmodesma | IEP | Neighborhood |
BP | GO:0009560 | embryo sac egg cell differentiation | IEP | Neighborhood |
BP | GO:0009606 | tropism | IEP | Neighborhood |
BP | GO:0009629 | response to gravity | IEP | Neighborhood |
BP | GO:0009630 | gravitropism | IEP | Neighborhood |
BP | GO:0009870 | defense response signaling pathway, resistance gene-dependent | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0016783 | sulfurtransferase activity | IEP | Neighborhood |
BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
CC | GO:0030054 | cell junction | IEP | Neighborhood |
MF | GO:0031071 | cysteine desulfurase activity | IEP | Neighborhood |
CC | GO:0031903 | microbody membrane | IEP | Neighborhood |
BP | GO:0032506 | cytokinetic process | IEP | Neighborhood |
BP | GO:0033044 | regulation of chromosome organization | IEP | Neighborhood |
BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
BP | GO:0042753 | positive regulation of circadian rhythm | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
MF | GO:0070063 | RNA polymerase binding | IEP | Neighborhood |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
BP | GO:1902410 | mitotic cytokinetic process | IEP | Neighborhood |
BP | GO:1903047 | mitotic cell cycle process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |