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  5. MA_20260g0010

MA_20260g0010


Description : component MAC3 of non-snRNP MOS4-associated complex


Gene families : OG0003024 (Archaeplastida) Phylogenetic Tree(s): OG0003024_tree ,
OG_05_0003757 (LandPlants) Phylogenetic Tree(s): OG_05_0003757_tree ,
OG_06_0006760 (SeedPlants) Phylogenetic Tree(s): OG_06_0006760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_20260g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00212570 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.04 Archaeplastida
AT2G33340 MAC3B MOS4-associated complex 3B 0.05 Archaeplastida
Cpa|evm.model.tig00001501.3 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
Cpa|evm.model.tig00001501.4 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cpa|evm.model.tig00021493.5 No alias Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
Cre02.g073650 No alias RNA processing.RNA splicing.spliceosome-associated... 0.01 Archaeplastida
GSVIVT01027911001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.06 Archaeplastida
LOC_Os10g32880.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
Mp4g08560.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Solyc09g090660.3.1 No alias component MAC3 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Zm00001e004625_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.04 Archaeplastida
Zm00001e012723_P001 No alias component MAC3 of non-snRNP MOS4-associated complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 390 425
IPR001680 WD40_repeat 257 294
IPR001680 WD40_repeat 490 514
IPR001680 WD40_repeat 303 340
IPR013915 Pre-mRNA_splic_Prp19 66 131
No external refs found!