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  5. AT5G41540

AT5G41540


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000769 (LandPlants) Phylogenetic Tree(s): OG_05_0000769_tree ,
OG_06_0000349 (SeedPlants) Phylogenetic Tree(s): OG_06_0000349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G41540
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00213460 No alias External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00154p00043260 No alias No description available 0.03 Archaeplastida
AT1G72920 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 Archaeplastida
AT2G14080 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT4G09430 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.04 Archaeplastida
GSVIVT01020983001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00097 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 Archaeplastida
Gb_00098 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 Archaeplastida
Gb_02566 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04749 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 Archaeplastida
Gb_12318 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_17461 No alias effector receptor (NLR) 0.03 Archaeplastida
Gb_17905 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 Archaeplastida
Gb_18066 No alias effector receptor (NLR) 0.02 Archaeplastida
Gb_20740 No alias effector receptor (NLR) 0.03 Archaeplastida
Gb_21496 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_29679 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 Archaeplastida
Gb_33284 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_36252 No alias effector receptor (NLR) 0.02 Archaeplastida
MA_10433003g0040 No alias effector receptor (NLR) 0.02 Archaeplastida
Pp3c14_11360V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
Solyc01g102840.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc01g102880.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc02g078680.1.1 No alias effector receptor (NLR) 0.01 Archaeplastida
Solyc04g007320.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc05g007850.2.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc07g052780.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc09g092410.4.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc12g096880.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc12g097000.2.1 No alias effector receptor (NLR) 0.04 Archaeplastida
Solyc12g097020.2.1 No alias effector receptor (NLR) 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006952 defense response ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000254 C-4 methylsterol oxidase activity IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003979 UDP-glucose 6-dehydrogenase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006065 UDP-glucuronate biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010067 procambium histogenesis IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010230 alternative respiration IEP Neighborhood
BP GO:0010371 regulation of gibberellin biosynthetic process IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010393 galacturonan metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010623 programmed cell death involved in cell development IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0017040 N-acylsphingosine amidohydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
CC GO:0045298 tubulin complex IEP Neighborhood
BP GO:0045488 pectin metabolic process IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0045597 positive regulation of cell differentiation IEP Neighborhood
BP GO:0046398 UDP-glucuronate metabolic process IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0048658 anther wall tapetum development IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055046 microgametogenesis IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0080064 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080147 root hair cell development IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900030 regulation of pectin biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 191 429
IPR011713 Leu-rich_rpt_3 605 623
IPR000157 TIR_dom 10 185
No external refs found!