AT5G42350

Description : Galactose oxidase/kelch repeat superfamily protein

Gene families : OG0007939 (Archaeplastida) Phylogenetic Tree(s): OG0007939_tree ,
OG_05_0006314 (LandPlants) Phylogenetic Tree(s): OG_05_0006314_tree ,
OG_06_0007576 (SeedPlants) Phylogenetic Tree(s): OG_06_0007576_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G42350
Cluster	HCCA: Cluster_22

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
BP	GO:0001558	regulation of cell growth	IMP	Interproscan
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008361	regulation of cell size	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0019005	SCF ubiquitin ligase complex	IPI	Interproscan
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000164	protein phosphatase type 1 complex	IEP	Neighborhood
BP	GO:0002229	defense response to oomycetes	IEP	Neighborhood
BP	GO:0002239	response to oomycetes	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003691	double-stranded telomeric DNA binding	IEP	Neighborhood
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0003964	RNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Neighborhood
MF	GO:0004629	phospholipase C activity	IEP	Neighborhood
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Neighborhood
MF	GO:0004930	G-protein coupled receptor activity	IEP	Neighborhood
MF	GO:0005484	SNAP receptor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005635	nuclear envelope	IEP	Neighborhood
CC	GO:0005795	Golgi stack	IEP	Neighborhood
CC	GO:0005798	Golgi-associated vesicle	IEP	Neighborhood
CC	GO:0005876	spindle microtubule	IEP	Neighborhood
CC	GO:0005885	Arp2/3 protein complex	IEP	Neighborhood
CC	GO:0005971	ribonucleoside-diphosphate reductase complex	IEP	Neighborhood
BP	GO:0006261	DNA-dependent DNA replication	IEP	Neighborhood
BP	GO:0006278	RNA-dependent DNA biosynthetic process	IEP	Neighborhood
BP	GO:0006405	RNA export from nucleus	IEP	Neighborhood
BP	GO:0006406	mRNA export from nucleus	IEP	Neighborhood
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Neighborhood
MF	GO:0008020	G-protein coupled photoreceptor activity	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
MF	GO:0008186	RNA-dependent ATPase activity	IEP	Neighborhood
CC	GO:0008540	proteasome regulatory particle, base subcomplex	IEP	Neighborhood
BP	GO:0009186	deoxyribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009631	cold acclimation	IEP	Neighborhood
BP	GO:0009739	response to gibberellin	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
MF	GO:0009881	photoreceptor activity	IEP	Neighborhood
MF	GO:0009883	red or far-red light photoreceptor activity	IEP	Neighborhood
BP	GO:0009956	radial pattern formation	IEP	Neighborhood
BP	GO:0010074	maintenance of meristem identity	IEP	Neighborhood
BP	GO:0010080	regulation of floral meristem growth	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Neighborhood
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEP	Neighborhood
BP	GO:0019321	pentose metabolic process	IEP	Neighborhood
BP	GO:0019827	stem cell population maintenance	IEP	Neighborhood
CC	GO:0030133	transport vesicle	IEP	Neighborhood
CC	GO:0030135	coated vesicle	IEP	Neighborhood
CC	GO:0030136	clathrin-coated vesicle	IEP	Neighborhood
CC	GO:0030140	trans-Golgi network transport vesicle	IEP	Neighborhood
MF	GO:0030371	translation repressor activity	IEP	Neighborhood
BP	GO:0032507	maintenance of protein location in cell	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0034635	glutathione transport	IEP	Neighborhood
BP	GO:0035265	organ growth	IEP	Neighborhood
MF	GO:0042162	telomeric DNA binding	IEP	Neighborhood
BP	GO:0042732	D-xylose metabolic process	IEP	Neighborhood
BP	GO:0042939	tripeptide transport	IEP	Neighborhood
MF	GO:0043047	single-stranded telomeric DNA binding	IEP	Neighborhood
BP	GO:0045003	double-strand break repair via synthesis-dependent strand annealing	IEP	Neighborhood
MF	GO:0045182	translation regulator activity	IEP	Neighborhood
BP	GO:0045185	maintenance of protein location	IEP	Neighborhood
MF	GO:0047012	sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0050657	nucleic acid transport	IEP	Neighborhood
BP	GO:0050658	RNA transport	IEP	Neighborhood
MF	GO:0051011	microtubule minus-end binding	IEP	Neighborhood
BP	GO:0051028	mRNA transport	IEP	Neighborhood
BP	GO:0051168	nuclear export	IEP	Neighborhood
BP	GO:0051236	establishment of RNA localization	IEP	Neighborhood
BP	GO:0051457	maintenance of protein location in nucleus	IEP	Neighborhood
BP	GO:0051651	maintenance of location in cell	IEP	Neighborhood
BP	GO:0060771	phyllotactic patterning	IEP	Neighborhood
BP	GO:0060772	leaf phyllotactic patterning	IEP	Neighborhood
BP	GO:0060774	auxin mediated signaling pathway involved in phyllotactic patterning	IEP	Neighborhood
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood
BP	GO:0071897	DNA biosynthetic process	IEP	Neighborhood
BP	GO:0072337	modified amino acid transport	IEP	Neighborhood
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Neighborhood
BP	GO:0098727	maintenance of cell number	IEP	Neighborhood
MF	GO:0098847	sequence-specific single stranded DNA binding	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1900150	regulation of defense response to fungus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	135	171
IPR006652	Kelch_1	357	388

External Links

No external refs found!

AT5G42350

Expression Profile

Co-expression Networks

Functional Annotation