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  5. MA_23673g0010

MA_23673g0010


Description : transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)


Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0000701 (SeedPlants) Phylogenetic Tree(s): OG_06_0000701_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_23673g0010
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00238950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01023582001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01033902001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01036447001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_33917 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.04 Archaeplastida
LOC_Os01g49830.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
LOC_Os04g49230.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
LOC_Os05g47650.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 Archaeplastida
MA_10432625g0010 No alias transcription factor (AP2-RAV) 0.06 Archaeplastida
MA_106270g0010 No alias transcription factor (RAV/NGATHA) 0.1 Archaeplastida
MA_161329g0020 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_953813g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c1_16700V3.1 No alias related to ABI3/VP1 1 0.02 Archaeplastida
Pp3c2_23660V3.1 No alias AP2/B3 transcription factor family protein 0.02 Archaeplastida
Zm00001e024165_P001 No alias transcription factor (RAV/NGATHA) 0.02 Archaeplastida
Zm00001e026443_P001 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
Zm00001e028111_P001 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 Archaeplastida
Zm00001e040214_P001 No alias transcription factor (RAV/NGATHA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 189 236
IPR003340 B3_DNA-bd 325 427
No external refs found!