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  5. MA_23830g0010

MA_23830g0010


Description : AP-4 complex subunit sigma OS=Arabidopsis thaliana (sp|o82201|ap4s_arath : 124.0)


Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0007286 (LandPlants) Phylogenetic Tree(s): OG_05_0007286_tree ,
OG_06_0008306 (SeedPlants) Phylogenetic Tree(s): OG_06_0008306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_23830g0010
Cluster HCCA: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00186170 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
AT4G35410 No alias Clathrin adaptor complex small chain family protein 0.04 Archaeplastida
Cre07.g324600 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 Archaeplastida
Cre09.g394100 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
Gb_30890 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 Archaeplastida
LOC_Os03g57040.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
LOC_Os08g30480.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 Archaeplastida
Pp3c12_2376V3.1 No alias Clathrin adaptor complex small chain family protein 0.03 Archaeplastida
Pp3c4_27730V3.1 No alias associated protein 19 0.04 Archaeplastida
Pp3c9_6760V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Smo271913 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
Zm00001e011050_P001 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006751 glutathione catabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016842 amidine-lyase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042219 cellular modified amino acid catabolic process IEP Neighborhood
BP GO:0043171 peptide catabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051382 kinetochore assembly IEP Neighborhood
BP GO:0051383 kinetochore organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 9 76
No external refs found!