Description : HR-like lesion-inducing protein-related
Gene families : OG0001776 (Archaeplastida) Phylogenetic Tree(s): OG0001776_tree ,
OG_05_0001771 (LandPlants) Phylogenetic Tree(s): OG_05_0001771_tree ,
OG_06_0002113 (SeedPlants) Phylogenetic Tree(s): OG_06_0002113_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G43460 | |
Cluster | HCCA: Cluster_386 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Smo169212 | No alias | No description available | 0.03 | Archaeplastida | |
Smo85994 | No alias | No description available | 0.04 | Archaeplastida | |
Zm00001e040580_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005783 | endoplasmic reticulum | IDA | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000354 | cis assembly of pre-catalytic spliceosome | IEP | Neighborhood |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
CC | GO:0005654 | nucleoplasm | IEP | Neighborhood |
CC | GO:0005686 | U2 snRNP | IEP | Neighborhood |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0009648 | photoperiodism | IEP | Neighborhood |
BP | GO:0009832 | plant-type cell wall biogenesis | IEP | Neighborhood |
CC | GO:0015030 | Cajal body | IEP | Neighborhood |
CC | GO:0016604 | nuclear body | IEP | Neighborhood |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
MF | GO:0030674 | protein binding, bridging | IEP | Neighborhood |
BP | GO:0035265 | organ growth | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
BP | GO:0048573 | photoperiodism, flowering | IEP | Neighborhood |
MF | GO:0060090 | molecular adaptor activity | IEP | Neighborhood |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008637 | HR_lesion | 1 | 134 |
No external refs found! |