MA_2434g0010

Description : HOX-like transcription factor

Gene families : OG0001780 (Archaeplastida) Phylogenetic Tree(s): OG0001780_tree ,
OG_05_0002605 (LandPlants) Phylogenetic Tree(s): OG_05_0002605_tree ,
OG_06_0003028 (SeedPlants) Phylogenetic Tree(s): OG_06_0003028_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_2434g0010
Cluster	HCCA: Cluster_393

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00137050	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.07	Archaeplastida
AT1G28420	HB-1	homeobox-1	0.03	Archaeplastida
AT5G44180	No alias	Homeodomain-like transcriptional regulator	0.08	Archaeplastida
Cpa\|evm.model.tig00020563.188	No alias	No description available	0.01	Archaeplastida
Cre03.g174500	No alias	Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01020605001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.1	Archaeplastida
GSVIVT01021113001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.09	Archaeplastida
LOC_Os05g48820.1	No alias	HOX-like transcription factor	0.06	Archaeplastida
LOC_Os07g42750.1	No alias	Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Pp3c16_15110V3.1	No alias	homeobox-1	0.09	Archaeplastida
Smo447019	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Solyc02g077660.3.1	No alias	HOX-like transcription factor	0.04	Archaeplastida
Solyc07g053610.3.1	No alias	HOX-like transcription factor	0.09	Archaeplastida
Zm00001e006057_P001	No alias	Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e020198_P001	No alias	HOX-like transcription factor	0.03	Archaeplastida
Zm00001e020199_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e020201_P001	No alias	no hits & (original description: none)	0.08	Archaeplastida
Zm00001e020202_P002	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e026524_P003	No alias	HOX-like transcription factor	0.04	Archaeplastida
Zm00001e028032_P001	No alias	HOX-like transcription factor	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	transcription, DNA-templated	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Neighborhood
CC	GO:0005730	nucleolus	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR028941	WHIM2_dom	662	734
IPR007759	HB1/Asxl_HTH	247	314
IPR028942	WHIM1_dom	475	516
IPR018501	DDT_dom	67	121

External Links

No external refs found!

MA_2434g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation