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  5. MA_246350g0010

MA_246350g0010


Description : transcription factor (RAV/NGATHA)


Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0073952 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_246350g0010
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01033902001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
GSVIVT01036447001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
LOC_Os01g04800.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
LOC_Os05g47650.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.04 Archaeplastida
LOC_Os06g01860.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
LOC_Os08g06120.1 No alias transcription factor (RAV/NGATHA) 0.02 Archaeplastida
MA_3834g0010 No alias transcription factor (RAV/NGATHA) 0.06 Archaeplastida
MA_865117g0010 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.05 Archaeplastida
Mp2g22250.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
Pp3c1_16700V3.1 No alias related to ABI3/VP1 1 0.02 Archaeplastida
Pp3c2_23660V3.1 No alias AP2/B3 transcription factor family protein 0.03 Archaeplastida
Solyc05g004000.1.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
Solyc08g013690.1.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
Solyc09g010230.2.1 No alias transcription factor (RAV/NGATHA) 0.06 Archaeplastida
Solyc12g098460.2.1 No alias AP2/ERF and B3 domain-containing transcription factor... 0.02 Archaeplastida
Zm00001e026443_P001 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 Archaeplastida
Zm00001e028111_P001 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
Zm00001e041372_P001 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 244 308
No external refs found!