AT5G44390

Description : FAD-binding Berberine family protein

Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G44390
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00124850	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
AMTR_s00032p00227420	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
AMTR_s00038p00163720	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
AMTR_s00038p00163940	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
AMTR_s00038p00164300	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
AT1G26380	No alias	FAD-binding Berberine family protein	0.09	Archaeplastida
AT1G26410	No alias	FAD-binding Berberine family protein	0.07	Archaeplastida
AT1G26420	No alias	FAD-binding Berberine family protein	0.09	Archaeplastida
AT1G30700	No alias	FAD-binding Berberine family protein	0.04	Archaeplastida
AT1G30730	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT4G20830	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT4G20860	No alias	FAD-binding Berberine family protein	0.04	Archaeplastida
AT5G44380	No alias	FAD-binding Berberine family protein	0.04	Archaeplastida
GSVIVT01020744001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
GSVIVT01021720001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
GSVIVT01021723001	No alias	Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01021726001	No alias	Berberine bridge enzyme-like 14 OS=Arabidopsis thaliana	0.04	Archaeplastida
Gb_03609	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Gb_24405	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
LOC_Os02g14090.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
LOC_Os06g35560.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
LOC_Os06g35630.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os06g35700.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os08g06170.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
MA_10428737g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Mp7g02610.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Solyc02g069690.1.1	No alias	Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc02g070110.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Solyc02g079440.3.1	No alias	Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc02g079450.1.1	No alias	Berberine bridge enzyme-like 23 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e030681_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Zm00001e040211_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0009055	electron transfer activity	ISS	Interproscan
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015849	organic acid transport	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0005217	intracellular ligand-gated ion channel activity	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006857	oligopeptide transport	IEP	Neighborhood
BP	GO:0006874	cellular calcium ion homeostasis	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009617	response to bacterium	IEP	Neighborhood
BP	GO:0009627	systemic acquired resistance	IEP	Neighborhood
BP	GO:0009751	response to salicylic acid	IEP	Neighborhood
BP	GO:0009814	defense response, incompatible interaction	IEP	Neighborhood
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0023014	signal transduction by protein phosphorylation	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
BP	GO:0031347	regulation of defense response	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	Neighborhood
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Neighborhood
BP	GO:0035303	regulation of dephosphorylation	IEP	Neighborhood
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Neighborhood
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042742	defense response to bacterium	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
MF	GO:0042937	tripeptide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0042938	dipeptide transport	IEP	Neighborhood
BP	GO:0042939	tripeptide transport	IEP	Neighborhood
BP	GO:0043200	response to amino acid	IEP	Neighborhood
BP	GO:0043201	response to leucine	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043562	cellular response to nitrogen levels	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051193	regulation of cofactor metabolic process	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0080052	response to histidine	IEP	Neighborhood
BP	GO:0080053	response to phenylalanine	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	87	224
IPR012951	BBE	480	538

External Links

No external refs found!

AT5G44390

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation