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  5. AT5G44440

AT5G44440


Description : FAD-binding Berberine family protein


Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G44440
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
AT1G30730 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT1G30760 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT4G20820 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT5G44380 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
GSVIVT01020745001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
GSVIVT01020746001 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021720001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
GSVIVT01021734001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_21188 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_24404 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os02g14090.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_26891g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Mp7g02610.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g022850.1.1 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g022860.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g070070.1.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070160.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc09g072660.4.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g054540.1.1 No alias Berberine bridge enzyme-like 26 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e014361_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0002832 negative regulation of response to biotic stimulus IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006649 phospholipid transfer to membrane IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
BP GO:0008154 actin polymerization or depolymerization IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009646 response to absence of light IEP Neighborhood
BP GO:0009647 skotomorphogenesis IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009720 detection of hormone stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009726 detection of endogenous stimulus IEP Neighborhood
BP GO:0009727 detection of ethylene stimulus IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009896 positive regulation of catabolic process IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0010296 prenylcysteine methylesterase activity IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010500 transmitting tissue development IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016630 protochlorophyllide reductase activity IEP Neighborhood
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0030041 actin filament polymerization IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
BP GO:0030497 fatty acid elongation IEP Neighborhood
BP GO:0031331 positive regulation of cellular catabolic process IEP Neighborhood
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Neighborhood
BP GO:0032102 negative regulation of response to external stimulus IEP Neighborhood
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
BP GO:0043901 negative regulation of multi-organism process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0045732 positive regulation of protein catabolic process IEP Neighborhood
BP GO:0045862 positive regulation of proteolysis IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0048462 carpel formation IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051723 protein methylesterase activity IEP Neighborhood
BP GO:0061136 regulation of proteasomal protein catabolic process IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
BP GO:0080126 ovary septum development IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900424 regulation of defense response to bacterium IEP Neighborhood
BP GO:1900425 negative regulation of defense response to bacterium IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
BP GO:1901483 regulation of transcription factor catabolic process IEP Neighborhood
BP GO:1901485 positive regulation of transcription factor catabolic process IEP Neighborhood
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Neighborhood
BP GO:1903050 regulation of proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1903052 positive regulation of proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1903362 regulation of cellular protein catabolic process IEP Neighborhood
BP GO:1903364 positive regulation of cellular protein catabolic process IEP Neighborhood
BP GO:1905328 plant septum development IEP Neighborhood
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012951 BBE 469 527
IPR006094 Oxid_FAD_bind_N 81 215
No external refs found!