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MA_2805g0010


Description : pre-60S subunit nuclear export factor (NMD3)


Gene families : OG0004088 (Archaeplastida) Phylogenetic Tree(s): OG0004088_tree ,
OG_05_0004208 (LandPlants) Phylogenetic Tree(s): OG_05_0004208_tree ,
OG_06_0004413 (SeedPlants) Phylogenetic Tree(s): OG_06_0004413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_2805g0010
Cluster HCCA: Cluster_482

Target Alias Description ECC score Gene Family Method Actions
Cre15.g640250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Zm00001e002431_P001 No alias pre-60S subunit nuclear export factor (NMD3) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
InterPro domains Description Start Stop
IPR007064 NMD3 21 250
No external refs found!