AT5G44830

Description : Pectin lyase-like superfamily protein

Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0017377 (LandPlants) Phylogenetic Tree(s): OG_05_0017377_tree ,
OG_06_0015125 (SeedPlants) Phylogenetic Tree(s): OG_06_0015125_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G44830
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00197210	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.04	Archaeplastida
AMTR_s00019p00031370	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	Archaeplastida
AMTR_s00074p00182020	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AT1G05660	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT1G10640	No alias	Pectin lyase-like superfamily protein	0.06	Archaeplastida
AT1G65570	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT1G80170	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT2G43860	No alias	Pectin lyase-like superfamily protein	0.05	Archaeplastida
AT2G43880	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT2G43890	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT3G26610	No alias	Pectin lyase-like superfamily protein	0.04	Archaeplastida
AT4G01890	No alias	Pectin lyase-like superfamily protein	0.04	Archaeplastida
AT5G44840	No alias	Pectin lyase-like superfamily protein	0.04	Archaeplastida
GSVIVT01008062001	No alias	Polygalacturonase OS=Juniperus ashei	0.04	Archaeplastida
GSVIVT01013772001	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana	0.01	Archaeplastida
GSVIVT01028189001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01031298001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032117001	No alias	Cell wall.pectin.modification and...	0.03	Archaeplastida
GSVIVT01032118001	No alias	Cell wall.pectin.modification and...	0.04	Archaeplastida
GSVIVT01032447001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01033303001	No alias	Cell wall.pectin.modification and...	0.03	Archaeplastida
GSVIVT01033362001	No alias	Cell wall.pectin.modification and...	0.03	Archaeplastida
GSVIVT01033364001	No alias	Cell wall.pectin.modification and...	0.03	Archaeplastida
GSVIVT01038241001	No alias	Polygalacturonase OS=Prunus persica	0.06	Archaeplastida
GSVIVT01038243001	No alias	Polygalacturonase OS=Prunus persica	0.03	Archaeplastida
Gb_07779	No alias	Polygalacturonase OS=Actinidia deliciosa...	0.04	Archaeplastida
LOC_Os03g59330.1	No alias	polygalacturonase (QRT2)	0.03	Archaeplastida
LOC_Os05g46510.1	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os05g46520.1	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.01	Archaeplastida
LOC_Os05g50260.1	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.01	Archaeplastida
LOC_Os11g14410.1	No alias	Polygalacturonase OS=Prunus persica...	0.04	Archaeplastida
MA_101764g0010	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10862g0010	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.03	Archaeplastida
MA_640601g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9231294g0010	No alias	No annotation	0.02	Archaeplastida
Solyc01g087280.2.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc12g009420.3.1	No alias	Polygalacturonase QRT2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc12g019140.3.1	No alias	Polygalacturonase OS=Prunus persica...	0.02	Archaeplastida
Solyc12g019220.1.1	No alias	Polygalacturonase OS=Prunus persica...	0.05	Archaeplastida
Solyc12g019230.2.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Solyc12g096730.3.1	No alias	Polygalacturonase OS=Prunus persica...	0.01	Archaeplastida
Zm00001e006097_P001	No alias	polygalacturonase (QRT2)	0.02	Archaeplastida
Zm00001e017465_P001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e027720_P001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e032294_P001	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	ISS	Interproscan
BP	GO:0005975	carbohydrate metabolic process	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003825	alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	IEP	Neighborhood
MF	GO:0004029	aldehyde dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004031	aldehyde oxidase activity	IEP	Neighborhood
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004805	trehalose-phosphatase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006349	regulation of gene expression by genetic imprinting	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008429	phosphatidylethanolamine binding	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0009685	gibberellin metabolic process	IEP	Neighborhood
BP	GO:0009686	gibberellin biosynthetic process	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009957	epidermal cell fate specification	IEP	Neighborhood
BP	GO:0009960	endosperm development	IEP	Neighborhood
BP	GO:0009996	negative regulation of cell fate specification	IEP	Neighborhood
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010061	regulation of trichoblast fate specification	IEP	Neighborhood
BP	GO:0010062	negative regulation of trichoblast fate specification	IEP	Neighborhood
BP	GO:0010191	mucilage metabolic process	IEP	Neighborhood
BP	GO:0010192	mucilage biosynthetic process	IEP	Neighborhood
BP	GO:0010214	seed coat development	IEP	Neighborhood
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	Neighborhood
BP	GO:0010453	regulation of cell fate commitment	IEP	Neighborhood
BP	GO:0010454	negative regulation of cell fate commitment	IEP	Neighborhood
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0016101	diterpenoid metabolic process	IEP	Neighborhood
BP	GO:0016102	diterpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016623	oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	IEP	Neighborhood
MF	GO:0016707	gibberellin 3-beta-dioxygenase activity	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0018479	benzaldehyde dehydrogenase (NAD+) activity	IEP	Neighborhood
MF	GO:0018488	aryl-aldehyde oxidase activity	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0042659	regulation of cell fate specification	IEP	Neighborhood
CC	GO:0043076	megasporocyte nucleus	IEP	Neighborhood
CC	GO:0043078	polar nucleus	IEP	Neighborhood
MF	GO:0045544	gibberellin 20-oxidase activity	IEP	Neighborhood
BP	GO:0045596	negative regulation of cell differentiation	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046688	response to copper ion	IEP	Neighborhood
BP	GO:0048317	seed morphogenesis	IEP	Neighborhood
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	Neighborhood
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	Neighborhood
MF	GO:0050362	L-tryptophan:2-oxoglutarate aminotransferase activity	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
MF	GO:0070529	L-tryptophan aminotransferase activity	IEP	Neighborhood
BP	GO:0071514	genetic imprinting	IEP	Neighborhood
BP	GO:0080050	regulation of seed development	IEP	Neighborhood
MF	GO:0080097	L-tryptophan:pyruvate aminotransferase activity	IEP	Neighborhood
BP	GO:0080113	regulation of seed growth	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903888	regulation of plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1903889	negative regulation of plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905422	negative regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:2000014	regulation of endosperm development	IEP	Neighborhood
BP	GO:2000067	regulation of root morphogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	6	317

External Links

No external refs found!

AT5G44830

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation