MA_305431g0010


Description : transcription factor (HD-ZIP IV)


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0004621 (SeedPlants) Phylogenetic Tree(s): OG_06_0004621_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_305431g0010
Cluster HCCA: Cluster_518

Target Alias Description ECC score Gene Family Method Actions
AT1G05230 HDG2 homeodomain GLABROUS 2 0.02 Archaeplastida
AT4G04890 PDF2 protodermal factor 2 0.04 Archaeplastida
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.05 Archaeplastida
GSVIVT01010600001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01030605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
Gb_05082 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Gb_16030 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Gb_19230 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
Gb_29468 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os02g45250.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
LOC_Os06g10600.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
LOC_Os08g04190.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os10g42490.1 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
Pp3c1_24020V3.1 No alias protodermal factor 2 0.02 Archaeplastida
Solyc01g091630.3.1 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Solyc02g080260.4.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Solyc03g031760.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g098200.4.1 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
Solyc03g120620.3.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc08g076370.3.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc10g005330.3.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e002453_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e006870_P004 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Zm00001e015997_P002 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Zm00001e017088_P001 No alias transcription factor (HD-ZIP IV) 0.1 Archaeplastida
Zm00001e021649_P002 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e023786_P003 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Zm00001e034755_P001 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Zm00001e036212_P002 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e039947_P001 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Zm00001e040312_P001 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Zm00001e041695_P001 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Zm00001e042218_P002 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 18 73
IPR002913 START_lipid-bd_dom 210 433
No external refs found!