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  5. AT5G46010

AT5G46010


Description : Homeodomain-like superfamily protein


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0001039 (SeedPlants) Phylogenetic Tree(s): OG_06_0001039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G46010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00149750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.04 Archaeplastida
GSVIVT01008424001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01011738001 No alias RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
GSVIVT01021144001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01025075001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01029942001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_36701 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os07g48560.1 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_10344604g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc02g077390.2.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Solyc02g083950.3.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Solyc06g075567.1.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Solyc11g072770.2.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Solyc11g072790.2.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e001527_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.05 Archaeplastida
Zm00001e028720_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e038272_P001 No alias transcription factor (WOX) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 53 110
No external refs found!