MA_339780g0010

Description : ligand-gated cation channel (GLR)

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0005412 (LandPlants) Phylogenetic Tree(s): OG_05_0005412_tree ,
OG_06_0004679 (SeedPlants) Phylogenetic Tree(s): OG_06_0004679_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_339780g0010
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00178690	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00179820	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
AMTR_s00019p00180640	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00180760	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00182440	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00182630	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00184790	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00019p00186040	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00021p00172130	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00021p00176450	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00023p00244390	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00130p00078370	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.03	Archaeplastida
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.03	Archaeplastida
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.04	Archaeplastida
GSVIVT01005235001	No alias	No description available	0.03	Archaeplastida
GSVIVT01021155001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01033150001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
GSVIVT01033160001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
Gb_19409	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_20613	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_28364	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
LOC_Os02g54640.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
LOC_Os07g01310.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
LOC_Os09g26144.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_10428521g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_141267g0010	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
MA_6222576g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_7310191g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_88153g0010	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Solyc02g077290.2.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc02g082480.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Zm00001e016082_P001	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR019594	Glu/Gly-bd	49	137

External Links

No external refs found!

MA_339780g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation