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  5. AT5G47175

AT5G47175 (LCR3)


Aliases : LCR3

Description : low-molecular-weight cysteine-rich 3


Gene families : OG0009463 (Archaeplastida) Phylogenetic Tree(s): OG0009463_tree ,
OG_05_0009493 (LandPlants) Phylogenetic Tree(s): OG_05_0009493_tree ,
OG_06_0007071 (SeedPlants) Phylogenetic Tree(s): OG_06_0007071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G47175
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT2G10535 LCR29 low-molecular-weight cysteine-rich 29 0.07 Archaeplastida
AT3G20993 LCR56 low-molecular-weight cysteine-rich 56 0.07 Archaeplastida
AT3G20997 LCR55 low-molecular-weight cysteine-rich 55 0.1 Archaeplastida
AT3G43505 LCR30 low-molecular-weight cysteine-rich 30 0.07 Archaeplastida
AT3G61172 LCR8 low-molecular-weight cysteine-rich 8 0.1 Archaeplastida
AT3G61175 LCR52 low-molecular-weight cysteine-rich 52 0.08 Archaeplastida
AT3G61182 LCR54 low-molecular-weight cysteine-rich 54 0.08 Archaeplastida
AT5G42797 LCR28 low-molecular-weight cysteine-rich 28 0.06 Archaeplastida
AT5G47075 LCR20 low-molecular-weight cysteine-rich 20 0.16 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
BP GO:0006885 regulation of pH IEP Neighborhood
BP GO:0007035 vacuolar acidification IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0010023 proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:0010231 maintenance of seed dormancy IEP Neighborhood
MF GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0030641 regulation of cellular pH IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0045851 pH reduction IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0051452 intracellular pH reduction IEP Neighborhood
BP GO:0051453 regulation of intracellular pH IEP Neighborhood
BP GO:0055067 monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0097437 maintenance of dormancy IEP Neighborhood
InterPro domains Description Start Stop
IPR010851 SLR1_pollen-bd 23 76
No external refs found!