- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0003874 (Archaeplastida) Phylogenetic Tree(s): OG0003874_tree ,
OG_05_0002683 (LandPlants) Phylogenetic Tree(s): OG_05_0002683_tree ,
OG_06_0003313 (SeedPlants) Phylogenetic Tree(s): OG_06_0003313_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G47455 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G15000 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.05 | Archaeplastida | |
| AT4G34265 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.05 | Archaeplastida | |
| GSVIVT01035615001 | No alias | No description available | 0.03 | Archaeplastida | |
| LOC_Os02g44100.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp6g13150.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| Solyc01g107450.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005739 | mitochondrion | IDA | Interproscan |
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| CC | GO:0005886 | plasma membrane | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Neighborhood |
| MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Neighborhood |
| BP | GO:0009817 | defense response to fungus, incompatible interaction | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0043076 | megasporocyte nucleus | IEP | Neighborhood |
| CC | GO:0043078 | polar nucleus | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |