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Description : transcription factor (MADS/AGL)
Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os02g36924.1 | No alias | transcription factor (MADS/AGL) | 0.1 | Archaeplastida | |
| LOC_Os03g03100.1 | No alias | transcription factor (MADS/AGL) | 0.12 | Archaeplastida | |
| LOC_Os06g11330.1 | No alias | transcription factor (MADS/AGL) | 0.09 | Archaeplastida | |
| MA_101463g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_10256834g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| MA_10289256g0010 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_133455g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_138440g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_15122g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| MA_16629g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| MA_175522g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| MA_19007g0010 | No alias | transcription factor (MADS/AGL) | 0.07 | Archaeplastida | |
| MA_206542g0010 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_254338g0010 | No alias | transcription factor (MADS/AGL) | 0.1 | Archaeplastida | |
| MA_32676g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| MA_57493g0010 | No alias | transcription factor (MADS/AGL) | 0.05 | Archaeplastida | |
| MA_6279308g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Solyc01g106170.4.1 | No alias | transcription factor (MADS/AGL) | 0.06 | Archaeplastida | |
| Solyc02g065730.2.1 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Solyc03g006830.3.1 | No alias | transcription factor (MADS/AGL) | 0.05 | Archaeplastida | |
| Solyc04g005320.3.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc04g076280.4.1 | No alias | MADS-box protein SVP OS=Arabidopsis thaliana... | 0.09 | Archaeplastida | |
| Solyc06g059970.4.1 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Solyc08g067230.4.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc08g080100.4.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 10 | 57 |
| No external refs found! |