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  5. AT5G48130

AT5G48130


Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0004141 (LandPlants) Phylogenetic Tree(s): OG_05_0004141_tree ,
OG_06_0006443 (SeedPlants) Phylogenetic Tree(s): OG_06_0006443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48130
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00262560 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
AMTR_s00029p00109650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.04 Archaeplastida
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.02 Archaeplastida
AMTR_s00137p00096710 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G67900 No alias Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.05 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
GSVIVT01000146001 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.04 Archaeplastida
GSVIVT01003773001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
GSVIVT01024542001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_15614 No alias BTB/POZ domain-containing protein At1g03010... 0.04 Archaeplastida
Gb_31331 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
Gb_37723 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
Gb_41063 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g35970.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os03g10800.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g22600.1 No alias BTB/POZ domain-containing protein At1g03010... 0.05 Archaeplastida
LOC_Os03g52880.1 No alias BTB/POZ domain-containing protein At5g66560... 0.04 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os06g08550.1 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os09g09370.2 No alias BTB/POZ domain-containing protein At5g47800... 0.02 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g02530.2 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g41910.2 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
MA_10430653g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
MA_10592g0020 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
MA_135496g0010 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_178653g0010 No alias BTB/POZ domain-containing protein At3g22104... 0.04 Archaeplastida
MA_26192g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
MA_42230g0010 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
MA_448959g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.05 Archaeplastida
MA_842546g0010 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
MA_89781g0010 No alias BTB/POZ domain-containing protein At5g48130... 0.05 Archaeplastida
MA_90165g0010 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Mp2g13430.1 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
Pp3c12_21560V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c13_16380V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c16_17420V3.1 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
Pp3c21_3700V3.1 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
Pp3c3_20030V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
Pp3c7_4380V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Smo231529 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
Smo93693 No alias Root phototropism protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g107180.3.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 Archaeplastida
Solyc02g064720.3.1 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g013570.3.1 No alias BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
Solyc07g048000.3.1 No alias BTB/POZ domain-containing protein At5g48130... 0.07 Archaeplastida
Solyc07g052970.3.1 No alias BTB/POZ domain-containing protein At3g22104... 0.02 Archaeplastida
Solyc09g048980.4.1 No alias BTB/POZ domain-containing protein At3g08570... 0.03 Archaeplastida
Solyc10g049660.2.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e003063_P004 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e008748_P001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e016726_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019629_P002 No alias BTB/POZ domain-containing protein At5g03250... 0.04 Archaeplastida
Zm00001e035388_P001 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Zm00001e038209_P001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
Zm00001e039269_P001 No alias BTB/POZ domain-containing protein At3g08570... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
CC GO:0000323 lytic vacuole IEP Neighborhood
BP GO:0001708 cell fate specification IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
MF GO:0008381 mechanosensitive ion channel activity IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009786 regulation of asymmetric cell division IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
CC GO:0009925 basal plasma membrane IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010086 embryonic root morphogenesis IEP Neighborhood
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Neighborhood
BP GO:0010453 regulation of cell fate commitment IEP Neighborhood
BP GO:0010455 positive regulation of cell fate commitment IEP Neighborhood
MF GO:0015562 efflux transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0017145 stem cell division IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
BP GO:0045597 positive regulation of cell differentiation IEP Neighborhood
BP GO:0045770 positive regulation of asymmetric cell division IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048103 somatic stem cell division IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050982 detection of mechanical stimulus IEP Neighborhood
BP GO:0051781 positive regulation of cell division IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:2000012 regulation of auxin polar transport IEP Neighborhood
BP GO:2000280 regulation of root development IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 217 445
IPR000210 BTB/POZ_dom 43 122
No external refs found!