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  5. MA_37003g0010

MA_37003g0010


Description : component RPL35 of LSU proteome component


Gene families : OG0002158 (Archaeplastida) Phylogenetic Tree(s): OG0002158_tree ,
OG_05_0002518 (LandPlants) Phylogenetic Tree(s): OG_05_0002518_tree ,
OG_06_0003253 (SeedPlants) Phylogenetic Tree(s): OG_06_0003253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_37003g0010
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00225520 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
AT2G39390 No alias Ribosomal L29 family protein 0.08 Archaeplastida
AT3G09500 No alias Ribosomal L29 family protein 0.08 Archaeplastida
AT3G55170 No alias Ribosomal L29 family protein 0.05 Archaeplastida
AT5G02610 No alias Ribosomal L29 family protein 0.07 Archaeplastida
Cpa|evm.model.tig00000241.79 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
GSVIVT01005972001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
GSVIVT01025050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
LOC_Os02g30050.1 No alias component RPL35 of LSU proteome component 0.03 Archaeplastida
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.05 Archaeplastida
Pp3c13_5200V3.1 No alias Ribosomal L29 family protein 0.07 Archaeplastida
Pp3c26_13720V3.1 No alias Ribosomal L29 family protein 0.04 Archaeplastida
Pp3c3_2800V3.1 No alias Ribosomal L29 family protein 0.03 Archaeplastida
Pp3c4_30730V3.1 No alias Ribosomal L29 family protein 0.06 Archaeplastida
Smo438324 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Smo79331 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Solyc04g010240.3.1 No alias component RPL35 of LSU proteome component 0.06 Archaeplastida
Solyc06g075620.3.1 No alias component RPL35 of LSU proteome component 0.02 Archaeplastida
Zm00001e008428_P002 No alias component RPL35 of LSU proteome component 0.04 Archaeplastida
Zm00001e014607_P001 No alias component RPL35 of LSU proteome component 0.07 Archaeplastida
Zm00001e040695_P003 No alias component RPL35 of LSU proteome component 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!