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  5. MA_38272g0010

MA_38272g0010


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0002851 (LandPlants) Phylogenetic Tree(s): OG_05_0002851_tree ,
OG_06_0009120 (SeedPlants) Phylogenetic Tree(s): OG_06_0009120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_38272g0010
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00121250 evm_27.TU.AmTr_v1... Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrhiza 0.03 Archaeplastida
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 Archaeplastida
AT3G16340 PDR1, ATPDR1 pleiotropic drug resistance 1 0.03 Archaeplastida
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.02 Archaeplastida
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.03 Archaeplastida
Cre11.g467597 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017204001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01028207001 No alias Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01033804001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
LOC_Os01g42410.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os02g21340.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10427683g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_117094g0010 No alias no description available(sp|h6ws94|pdr1_pethy : 134.0) 0.03 Archaeplastida
MA_12781g0010 No alias ABC transporter G family member 31 OS=Oryza sativa... 0.03 Archaeplastida
MA_160238g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_84624g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
Mp2g03890.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp2g14210.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp4g06670.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Smo441722 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Solyc01g101070.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc08g067610.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc09g091660.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc09g091670.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 8 116
IPR013581 PDR_assoc 299 357
No external refs found!