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  5. MA_38735g0020

MA_38735g0020


Description : splicing factor (WSL4)


Gene families : OG0011209 (Archaeplastida) Phylogenetic Tree(s): OG0011209_tree ,
OG_05_0011067 (LandPlants) Phylogenetic Tree(s): OG_05_0011067_tree ,
OG_06_0011718 (SeedPlants) Phylogenetic Tree(s): OG_06_0011718_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_38735g0020
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
MA_58429g0010 No alias splicing factor (WSL4) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 476 523
IPR002885 Pentatricopeptide_repeat 266 315
IPR002885 Pentatricopeptide_repeat 126 175
IPR002885 Pentatricopeptide_repeat 62 105
IPR002885 Pentatricopeptide_repeat 410 455
IPR002885 Pentatricopeptide_repeat 196 245
IPR002885 Pentatricopeptide_repeat 341 385
No external refs found!