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  5. AT5G49180

AT5G49180


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0003930 (SeedPlants) Phylogenetic Tree(s): OG_06_0003930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49180
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00044320 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT3G60730 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.04 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.03 Archaeplastida
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Gb_10522 No alias pectin methylesterase 0.02 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.03 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.03 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.02 Archaeplastida
Gb_28162 No alias pectin methylesterase 0.02 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g20980.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os11g08750.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10377619g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435891g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10436266g0010 No alias Pectinesterase 3 OS=Citrus sinensis... 0.03 Archaeplastida
MA_130858g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_158002g0020 No alias pectin methylesterase 0.02 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_354248g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_436039g0010 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.03 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Smo76314 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
Solyc03g078090.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc05g047590.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g017600.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g064170.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e008055_P001 No alias pectin methylesterase 0.01 Archaeplastida
Zm00001e017515_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e041757_P001 No alias pectin methylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009505 plant-type cell wall ISS Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005365 myo-inositol transmembrane transporter activity IEP Neighborhood
MF GO:0005366 myo-inositol:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
BP GO:0006624 vacuolar protein processing IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Neighborhood
BP GO:0008655 pyrimidine-containing compound salvage IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
CC GO:0009705 plant-type vacuole membrane IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009808 lignin metabolic process IEP Neighborhood
BP GO:0009809 lignin biosynthetic process IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0009964 negative regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
BP GO:0010023 proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
BP GO:0010224 response to UV-B IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015166 polyol transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
BP GO:0015791 polyol transport IEP Neighborhood
BP GO:0015798 myo-inositol transport IEP Neighborhood
BP GO:0015850 organic hydroxy compound transport IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016595 glutamate binding IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
MF GO:0016711 flavonoid 3'-monooxygenase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
CC GO:0031312 extrinsic component of organelle membrane IEP Neighborhood
MF GO:0033729 anthocyanidin reductase activity IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
CC GO:0042406 extrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
MF GO:0045552 dihydrokaempferol 4-reductase activity IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
MF GO:0050589 leucocyanidin oxygenase activity IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
BP GO:0080027 response to herbivore IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
BP GO:1900384 regulation of flavonol biosynthetic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 54 204
IPR000070 Pectinesterase_cat 259 556
No external refs found!