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  5. AT5G49840

AT5G49840


Description : ATP-dependent Clp protease


Gene families : OG0001356 (Archaeplastida) Phylogenetic Tree(s): OG0001356_tree ,
OG_05_0001187 (LandPlants) Phylogenetic Tree(s): OG_05_0001187_tree ,
OG_06_0002043 (SeedPlants) Phylogenetic Tree(s): OG_06_0002043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49840
Cluster HCCA: Cluster_1


Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0016887 ATPase activity ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
CC GO:0000419 RNA polymerase V complex IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004595 pantetheine-phosphate adenylyltransferase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0004930 G-protein coupled receptor activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005945 6-phosphofructokinase complex IEP Neighborhood
BP GO:0006140 regulation of nucleotide metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006625 protein targeting to peroxisome IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008020 G-protein coupled photoreceptor activity IEP Neighborhood
CC GO:0008076 voltage-gated potassium channel complex IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0008970 phospholipase A1 activity IEP Neighborhood
BP GO:0009590 detection of gravity IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009647 skotomorphogenesis IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009649 entrainment of circadian clock IEP Neighborhood
BP GO:0009660 amyloplast organization IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
BP GO:0009959 negative gravitropism IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015919 peroxisomal membrane transport IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
BP GO:0015939 pantothenate metabolic process IEP Neighborhood
BP GO:0015940 pantothenate biosynthetic process IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016558 protein import into peroxisome matrix IEP Neighborhood
CC GO:0016602 CCAAT-binding factor complex IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016906 sterol 3-beta-glucosyltransferase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
BP GO:0030808 regulation of nucleotide biosynthetic process IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0032456 endocytic recycling IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
CC GO:0034702 ion channel complex IEP Neighborhood
CC GO:0034703 cation channel complex IEP Neighborhood
CC GO:0034705 potassium channel complex IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043574 peroxisomal transport IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0048581 negative regulation of post-embryonic development IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051196 regulation of coenzyme metabolic process IEP Neighborhood
BP GO:0051241 negative regulation of multicellular organismal process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP Neighborhood
BP GO:0072662 protein localization to peroxisome IEP Neighborhood
BP GO:0072663 establishment of protein localization to peroxisome IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
BP GO:0080020 regulation of coenzyme A biosynthetic process IEP Neighborhood
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1900371 regulation of purine nucleotide biosynthetic process IEP Neighborhood
BP GO:1900542 regulation of purine nucleotide metabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 474 545
IPR003959 ATPase_AAA_core 262 467
No external refs found!