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  5. MA_413510g0010

MA_413510g0010


Description : F-box protein PP2-B11 OS=Arabidopsis thaliana (sp|q949s5|p2b11_arath : 175.0)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_413510g0010
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.03 Archaeplastida
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.03 Archaeplastida
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.03 Archaeplastida
AT2G02300 PP2-B5, AtPP2-B5 phloem protein 2-B5 0.05 Archaeplastida
AT2G02310 AtPP2-B6, PP2-B6 phloem protein 2-B6 0.03 Archaeplastida
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.06 Archaeplastida
GSVIVT01003897001 No alias F-box protein At2g02240 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01019854001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os02g56820.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_179528g0010 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_227118g0010 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g03850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp4g13890.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo271662 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc12g096900.2.1 No alias effector receptor (NLR) 0.07 Archaeplastida
Solyc12g098200.2.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 134 294
IPR001810 F-box_dom 42 82
No external refs found!