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  5. MA_423393g0010

MA_423393g0010


Description : protein kinase (PEK). regulator component SPA of COP1-SPA E3 ligase subcomplex


Gene families : OG0000790 (Archaeplastida) Phylogenetic Tree(s): OG0000790_tree ,
OG_05_0001763 (LandPlants) Phylogenetic Tree(s): OG_05_0001763_tree ,
OG_06_0005180 (SeedPlants) Phylogenetic Tree(s): OG_06_0005180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_423393g0010
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00097p00139510 evm_27.TU.AmTr_v1... External stimuli response.light.red/far red... 0.04 Archaeplastida
AT2G32950 FUS1, EMB168,... Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Cre02.g085050 No alias E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01007271001 No alias External stimuli response.light.red/far red... 0.03 Archaeplastida
Pp3c2_15860V3.1 No alias SPA1-related 3 0.02 Archaeplastida
Smo141846 No alias External stimuli response.light.red/far red... 0.03 Archaeplastida
Smo98534 No alias External stimuli response.light.red/far red... 0.02 Archaeplastida
Zm00001e015983_P001 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.02 Archaeplastida
Zm00001e019928_P005 No alias protein kinase (PEK). regulator component SPA of... 0.02 Archaeplastida
Zm00001e028209_P002 No alias protein kinase (PEK). regulator component SPA of... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 316 347
IPR001680 WD40_repeat 227 263
IPR001680 WD40_repeat 272 305
No external refs found!