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  5. MA_45110g0010

MA_45110g0010


Description : No annotation


Gene families : OG0002920 (Archaeplastida) Phylogenetic Tree(s): OG0002920_tree ,
OG_05_0004098 (LandPlants) Phylogenetic Tree(s): OG_05_0004098_tree ,
OG_06_0004540 (SeedPlants) Phylogenetic Tree(s): OG_06_0004540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_45110g0010
Cluster HCCA: Cluster_437

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00017150 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00022p00020890 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s01224p00002240 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT2G46560 No alias transducin family protein / WD-40 repeat family protein 0.09 Archaeplastida
Cre04.g223000 No alias No description available 0.02 Archaeplastida
GSVIVT01027171001 No alias No description available 0.1 Archaeplastida
LOC_Os01g37120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g21310.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c3_34200V3.1 No alias transducin family protein / WD-40 repeat family protein 0.02 Archaeplastida
Solyc01g096110.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e027708_P001 No alias No annotation 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!