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  5. AT5G51980

AT5G51980


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0001128 (Archaeplastida) Phylogenetic Tree(s): OG0001128_tree ,
OG_05_0002994 (LandPlants) Phylogenetic Tree(s): OG_05_0002994_tree ,
OG_06_0003862 (SeedPlants) Phylogenetic Tree(s): OG_06_0003862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G51980
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027214001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
CC GO:0000322 storage vacuole IEP Neighborhood
CC GO:0000326 protein storage vacuole IEP Neighborhood
BP GO:0000354 cis assembly of pre-catalytic spliceosome IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004623 phospholipase A2 activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004708 MAP kinase kinase activity IEP Neighborhood
MF GO:0004709 MAP kinase kinase kinase activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
MF GO:0005344 oxygen carrier activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005635 nuclear envelope IEP Neighborhood
CC GO:0005686 U2 snRNP IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0007029 endoplasmic reticulum organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009631 cold acclimation IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009643 photosynthetic acclimation IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0009956 radial pattern formation IEP Neighborhood
MF GO:0009973 adenylyl-sulfate reductase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010080 regulation of floral meristem growth IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
MF GO:0010427 abscisic acid binding IEP Neighborhood
BP GO:0010449 root meristem growth IEP Neighborhood
BP GO:0010492 maintenance of shoot apical meristem identity IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
CC GO:0015030 Cajal body IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
BP GO:0015669 gas transport IEP Neighborhood
BP GO:0015671 oxygen transport IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016629 12-oxophytodienoate reductase activity IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0019840 isoprenoid binding IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033037 polysaccharide localization IEP Neighborhood
MF GO:0033293 monocarboxylic acid binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0035265 organ growth IEP Neighborhood
BP GO:0035266 meristem growth IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
MF GO:0043178 alcohol binding IEP Neighborhood
BP GO:0043200 response to amino acid IEP Neighborhood
MF GO:0043295 glutathione binding IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045739 positive regulation of DNA repair IEP Neighborhood
BP GO:0046482 para-aminobenzoic acid metabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0047893 flavonol 3-O-glucosyltransferase activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051552 flavone metabolic process IEP Neighborhood
BP GO:0051553 flavone biosynthetic process IEP Neighborhood
BP GO:0051554 flavonol metabolic process IEP Neighborhood
BP GO:0051555 flavonol biosynthetic process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0052545 callose localization IEP Neighborhood
BP GO:0055088 lipid homeostasis IEP Neighborhood
BP GO:0055089 fatty acid homeostasis IEP Neighborhood
BP GO:0055090 acylglycerol homeostasis IEP Neighborhood
BP GO:0055091 phospholipid homeostasis IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0060771 phyllotactic patterning IEP Neighborhood
BP GO:0060772 leaf phyllotactic patterning IEP Neighborhood
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070328 triglyceride homeostasis IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0071617 lysophospholipid acyltransferase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0071782 endoplasmic reticulum tubular network IEP Neighborhood
BP GO:0071786 endoplasmic reticulum tubular network organization IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
CC GO:0098827 endoplasmic reticulum subcompartment IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
MF GO:1900750 oligopeptide binding IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902065 response to L-glutamate IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000693 positive regulation of seed maturation IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 305 339
IPR001680 WD40_repeat 143 179
IPR001680 WD40_repeat 265 300
No external refs found!