AT5G52155


No description available


Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0020651 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019891 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52155
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00114060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT3G47180 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G31450 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G07225 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G52140 No alias RING/U-box superfamily protein 0.1 Archaeplastida
GSVIVT01008343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01022110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01036994001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
MA_8313423g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032327_P003 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0080117 secondary growth IEP Neighborhood
BP GO:0080190 lateral growth IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!